Monday, November 10, 2014

Earth Microbiome (EMP)

EMP has been down for months. Trying to get access to their databases.
Heard from EMP: rebuilding database. any day now it will be up and running

Got access to the EMP files from Jack Gilbert and Sean Gibbons
  • open reference OTU table (.biom)
  • closed reference OTU table (.biom)
  • rep sequences (.fna)
  • phylogenetic tree (.tre)
  • metadata file (.txt)
  • taxonomic assignments (.txt) - from emp_10k_rdp


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